Cm2.1 (WS 2006/2007)

title CELLmicrocosmos 2.1 - MembranVisualisierung
semester WS 2006/2007
periode 18.10.2006-22.05.2007
leader Björn Sommer, Prof. Ralf Hofestädt
doc.number 392175
amount 392139
participants Andrea Steinmetz
Christian Fink
Matthias Koch
Ralf Mertens
Sebastian Schneider
Tim Dingersen
summary The aim of the project seminar CELLmicrocosmos 2.1 is to create a newer, faster and much more scientificial oriented version of the membrane editor built in CELLmicrocosmos 2 (S2005/2006)

aims

introduction

The aim of the project seminar CELLmicrocosmos 2.1 is to create a newer, faster and much more scientificial oriented version of the membrane editor built in CELLmicrocosmos 2 (S2005/2006).

pre_Cm2_1__2_0 (swf)
- the introduction of the course, for navigation use the arrow-keys
 (german)

talks 11.11.2006

PDB-Aufbau, Andrea Steinmetz (pdf)
- the basic knowledge about proteins and the PDB-format
 (german)

Protein-Datenbanken, Christian Fink (pdf)
- some basic informations about the databases PDB,
  PDB_TM, OPM, HIC-UP and Klotho
 (german)

Software zur Visualisierung von Proteinen, Tim Dingersen (pdf)
- introducing SwissView, Chimera, ICM-Browser, Jmol, amira
 (german)

talks 27.11.2006

Visualisierung von Zellvorgängen, Ralf Mertens (pdf)
- introducing Cell Designer, Cell Illustrator and Virtual Cell
 (german)

Membran-Aufbau, Michael Hertrich (pdf)
- the basic knowledge about the composition of membranes
 (german)

XML und seine Untersprachen CellML, CSML, SBML, Matthias Koch (pdf)
- the utilisation of XML in bioinformatics
 (german)

amira, Björn Sommer (swf)
- informations according our software-package amira
 for navigation use the arrow-keys (german)

talks 04.12.2006

Jmol-Vortrag, Sebastian Schneider (pdf)
- an overview according the Jmol-package
 (german)

Lastenheft, Björn Sommer (swf)
- a short introduction to the usage of a lastenheft
 for navigation use the arrow-keys (german)

results

Here you can download the results of our CELLmicrocosmos 2.1 project:

presentations

presentation 22.05.2007 (pdf)
- this is the presentation of the Cm2.1 project (german)

the future

This project was continued by a lot of people. Please go to the project page to find the WebStart application, which is now on the way to version 2.2:

Cm2.CELLmicrocosmos.org

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